June is by far the best month, wherein you can get cheapest flights for San Diego to San Juan. Meanwhile, is perceived as the expensive month due to the varying factors. That’s why it’s highly advised to make advanced online flight booking to save huge amounts of money.
Disclaimer - All the above-mentioned fares were found within last 48 hrs. The displayed fares are based on historical data and are subject to change. The fares cannot be guaranteed at the time of booking.
SAN
20:55
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
11:01
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
16:50
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
03:55
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
22:40
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
12:00
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
08:00
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
19:29
San Juan
Luis Munoz Marin International Airport
Fri, 27 Mar 2026
SAN
18:30
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
11:49
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
21:59
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
13:40
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
13:00
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
00:12
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
17:42
San Diego
San Diego International Airport
Fri , 27 Mar 2026
SJU
05:12
San Juan
Luis Munoz Marin International Airport
Sat, 28 Mar 2026
SAN
06:15
San Diego
San Diego International Airport
Sun , 22 Jun 2025
SJU
20:38
San Juan
Luis Munoz Marin International Airport
Sun, 22 Jun 2025
SAN
20:33
San Diego
San Diego International Airport
Sun , 22 Jun 2025
SJU
14:59
San Juan
Luis Munoz Marin International Airport
Mon, 23 Jun 2025
SAN
11:32
San Diego
San Diego International Airport
Sun , 22 Jun 2025
SJU
00:08
San Juan
Luis Munoz Marin International Airport
Mon, 23 Jun 2025
Flying from San Diego to San Juan has never been easier. Whether you’re planning a short business trip, a weekend getaway, or reconnecting with family and friends, Easemytrip brings you the best deals, seamless booking, and flexible options for this popular flight route. Our platform is built to help travellers like you compare flight prices, explore direct and connecting options, and find the perfect departure time — all within a few clicks.
The air route between San Diego to San Juan is one of the most frequently travelled, offering reliable services from top airlines and excellent connectivity between San Diego International Airport (SAN) and Luis Munoz Marin International Airport (SJU). You can expect a flight distance of approximately km, and most direct services cover it in around 13:27.
Let’s take a closer look at everything you need to know before booking your flight from San Diego to San Juan.
Flight Details | Information |
---|---|
Route Distance | km |
Average Flight Time | 13:27 hrs |
Departure Airport | San Diego International Airport (SAN) |
Arrival Airport | Luis Munoz Marin International Airport (SJU) |
Cabin Classes Available | Economy Class, Premium Economy, Business Class, First Class |
Direct Flights | NO |
Common Airlines | JetBlue Airways, American Airlines, Delta Airlines, United Airlines |
The route is serviced regularly by both full-service and budget airlines, catering to all types of travellers — from those looking for no-frills budget options to those preferring business and first-class comfort. If you're flying for business, early morning weekday flights are a great choice, while leisure travellers often opt for weekend and evening departures.