March is by far the best month, wherein you can get cheapest flights for Manila to El Nido. Meanwhile, is perceived as the expensive month due to the varying factors. That’s why it’s highly advised to make advanced online flight booking to save huge amounts of money.
Disclaimer - All the above-mentioned fares were found within last 48 hrs. The displayed fares are based on historical data and are subject to change. The fares cannot be guaranteed at the time of booking.

Manila
09:35
Manila
Ninoy Aquino International Airport
Mon , 06 Apr 2026

El Nido
17:25
El Nido
El Nido Airport
Mon, 06 Apr 2026

Manila
09:35
Manila
Ninoy Aquino International Airport
Sun , 05 Apr 2026

El Nido
17:25
El Nido
El Nido Airport
Sun, 05 Apr 2026

Manila
10:30
Manila
Ninoy Aquino International Airport
Sat , 28 Mar 2026

El Nido
17:05
El Nido
El Nido Airport
Sat, 28 Mar 2026










Flying from Manila to El Nido has never been easier. Whether you’re planning a short business trip, a weekend getaway, or reconnecting with family and friends, Easemytrip brings you the best deals, seamless booking, and flexible options for this popular flight route. Our platform is built to help travellers like you compare flight prices, explore direct and connecting options, and find the perfect departure time — all within a few clicks.
The air route between Manila to El Nido is one of the most frequently travelled, offering reliable services from top airlines and excellent connectivity between Ninoy Aquino International Airport (MNL) and El Nido Airport (ENI). You can expect a flight distance of approximately 406 km, and most direct services cover it in around 07:25.
Let’s take a closer look at everything you need to know before booking your flight from Manila to El Nido.
| Flight Details | Information |
|---|---|
| Route Distance | 406 km |
| Average Flight Time | 07:25 hrs |
| Departure Airport | Ninoy Aquino International Airport (MNL) |
| Arrival Airport | El Nido Airport (ENI) |
| Cabin Classes Available | Economy Class, Premium Economy, Business Class, First Class |
| Direct Flights | NO |
| Common Airlines | Cebu Pacific Air |
The route is serviced regularly by both full-service and budget airlines, catering to all types of travellers — from those looking for no-frills budget options to those preferring business and first-class comfort. If you're flying for business, early morning weekday flights are a great choice, while leisure travellers often opt for weekend and evening departures.