May is by far the best month, wherein you can get cheapest flights for Kota Kinabalu to Manila. Meanwhile, is perceived as the expensive month due to the varying factors. That’s why it’s highly advised to make advanced online flight booking to save huge amounts of money.
Disclaimer - All the above-mentioned fares were found within last 48 hrs. The displayed fares are based on historical data and are subject to change. The fares cannot be guaranteed at the time of booking.

Kota Kinabalu
20:30
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
12:45
Manila
Ninoy Aquino International Airport
Thu, 04 Jun 2026

Kota Kinabalu
06:50
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
17:25
Manila
Ninoy Aquino International Airport
Wed, 03 Jun 2026

Kota Kinabalu
05:20
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
14:05
Manila
Ninoy Aquino International Airport
Wed, 03 Jun 2026

Kota Kinabalu
19:20
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
02:25
Manila
Ninoy Aquino International Airport
Thu, 04 Jun 2026

Kota Kinabalu
06:50
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
16:20
Manila
Ninoy Aquino International Airport
Wed, 03 Jun 2026

Kota Kinabalu
09:50
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
17:25
Manila
Ninoy Aquino International Airport
Wed, 03 Jun 2026

Kota Kinabalu
09:50
Kota Kinabalu
Kota Kinabalu International Airport
Wed , 03 Jun 2026

Manila
18:40
Manila
Ninoy Aquino International Airport
Wed, 03 Jun 2026

Kota Kinabalu
12:15
Kota Kinabalu
Kota Kinabalu International Airport
Sat , 30 May 2026

Manila
11:35
Manila
Ninoy Aquino International Airport
Sun, 31 May 2026

Kota Kinabalu
12:15
Kota Kinabalu
Kota Kinabalu International Airport
Sat , 30 May 2026

Manila
23:20
Manila
Ninoy Aquino International Airport
Sat, 30 May 2026

Kota Kinabalu
22:20
Kota Kinabalu
Kota Kinabalu International Airport
Sat , 30 May 2026

Manila
14:05
Manila
Ninoy Aquino International Airport
Sun, 31 May 2026

Kota Kinabalu
05:20
Kota Kinabalu
Kota Kinabalu International Airport
Sat , 30 May 2026

Manila
14:05
Manila
Ninoy Aquino International Airport
Sat, 30 May 2026










Flying from Kota Kinabalu to Manila has never been easier. Whether you’re planning a short business trip, a weekend getaway, or reconnecting with family and friends, Easemytrip brings you the best deals, seamless booking, and flexible options for this popular flight route. Our platform is built to help travellers like you compare flight prices, explore direct and connecting options, and find the perfect departure time — all within a few clicks.
The air route between Kota Kinabalu to Manila is one of the most frequently travelled, offering reliable services from top airlines and excellent connectivity between Kota Kinabalu International Airport (BKI) and Ninoy Aquino International Airport (MNL). You can expect a flight distance of approximately 1097 km, and most direct services cover it in around 10:12.
Let’s take a closer look at everything you need to know before booking your flight from Kota Kinabalu to Manila.
| Flight Details | Information |
|---|---|
| Route Distance | 1097 km |
| Average Flight Time | 10:12 hrs |
| Departure Airport | Kota Kinabalu International Airport (BKI) |
| Arrival Airport | Ninoy Aquino International Airport (MNL) |
| Cabin Classes Available | Economy Class, Premium Economy, Business Class, First Class |
| Direct Flights | NO |
| Common Airlines | Singapore Airlines, Malaysia Airlines, China Southern Airlines, Philippine Air lines |
The route is serviced regularly by both full-service and budget airlines, catering to all types of travellers — from those looking for no-frills budget options to those preferring business and first-class comfort. If you're flying for business, early morning weekday flights are a great choice, while leisure travellers often opt for weekend and evening departures.